Publications

Sanfilippo, J., Lorestani, A., Koch, M.D., Bratton, B.P., Siryaporn, A., Stone, H.A., Z. Gitai, (2019) Microfluidic-based transcriptomics reveal force-independent bacterial rheosensing. Nat. Micro.

Klumpp, S., Siryaporn, A., S. van Teeffelen, (2019) Focus on bacterial mechanics, New Journal of Physics 21.

Rosenzweig, R., Perinbam, K., Ly, V.K., Ahrar, S., Siryaporn, A.*, A. Yee*, (2019) Nanopillared Surfaces Disrupt Pseudomonas aeruginosa Mechano-responsive Upstream Motility. ACS Applied Materials & Interfaces 11(11): 10532–10539.

Trivedi, R. , Crooks, J., Auer, J., Pendry, J., Siryaporn, A., Abbott, N., Gitai, Z. and D. Weibel, (2018) Mechanical genomic studies reveal the role of D-alanine metabolism in Pseudomonas aeruginosa cell stiffness. mBio 9(5): e01340-18.

Perinbam, K., A. Siryaporn, (2018) A rapid image-based bacterial virulence assay using amoeba, J Vis Exp 136.

Kannan, A., Z. Yang, M.K. Kim, Z. Gitai & H. Stone & A. Siryaporn, (2018) Dynamic switching enables efficient bacterial colonization in flow, Proc Natl Acad Sci 115(21): 5438-5443.

Hedde, P.N., Malacrida, L., Ahrar, S., Siryaporn, A., E. Gratton, (2017) sideSPIM – Selective plane illumination based on a conventional inverted microscope, Biomedical Optics Express,  8(9): 3918-3937;

Persat, A., C.D. Nadell, M.K. Kim, F. Ingremeau, A. Siryaporn, N.S. Wingreen, B.L. Bassler, Z. Gitai, H.A. Stone, (2015) The Mechanical World of Bacteria. Cell, 161(5): 988-997.

Siryaporn, A., M. Y. Kim, Y. Shen, H. Stone & Z. Gitai, (2015) Colonization, competition and dispersal of pathogens in fluid flow networks. Current Biology, 25(9): 1201-1207.

Miller, L.C., C.T. O’Loughlin, Z. Zhang, A. Siryaporn, B. Bassler & M. Semmelhack, (2015) Development of potent inhibitors of pyocyanin production in Pseudomonas aeruginosa. J. Med. Chem. 58(3):1298-1306.

Siryaporn, A., S. L. Kuchma, G. A. O’Toole & Z. Gitai, (2014) Surface attachment induces P. aeruginosa virulence. PNAS 111(47): 16860-16865.

Cowles, K .N., T. S. Moser, A. Siryaporn, N. Nyakudarika, W. Dixon, J. J. Turner, and Z. Gitai, (2013) The putative Poc complex controls two distinct Pseudomonas aeruginosa polar motility mechanisms. Mol Microbiol 90(5): 923-938.

O’Loughlin, C.T., L. C. Miller, A. Siryaporn, K. Drescher, M. Semmelhack & B. Bassler, (2013) A quorum-sensing inhibitor blocks Pseudomonas aeruginosa virulence and biofilm formation. PNAS 110(44): 17981-6.

Shen, Y.*, A. Siryaporn, S. Lecuyer, Z. Gitai & H. Stone, (2012) Flow Directs Surface-Attached Bacteria to Twitch Upstream. Biophys J 103(1): 146-151.

Bakshi, S., A. Siryaporn, M. Goulian & J.C. Weisshaar, (2012) Superresolution Imaging of Ribosomes and RNA Polymerase in Live Escherichia coli Cells. Mol Microbiol 85(1): 21-38.

Siryaporn, A., B. S. Perchuk, M. T. Laub & M. Goulian, (2010) Evolving a robust signal transduction pathway from weak cross-talk. Mol Syst Biol 6: 452.

Siryaporn, A<. & M. Goulian, (2010) Characterizing cross-talk in vivo: avoiding pitfalls and overinterpretation. Methods Enzymol 471: 1-16.

Siryaporn, A. & M. Goulian, (2008) Cross-talk suppression between the CpxA-CpxR and EnvZ-OmpR two-component systems in E. coli. Mol Microbiol 70: 494-506.

Skerker, J. M., B. S. Perchuk, A. Siryaporn, E. A. Lubin, O. Ashenberg, M. Goulian & M. T. Laub, (2008) Rewiring the specificity of two-component signal transduction systems. Cell 133: 1043-1054.

Lizotte, D. L., J. J. Blakeslee, A. Siryaporn, J. T. Heath & A. DeLong, (2008) A PP2A active site mutant impedes growth and causes misregulation of native catalytic subunit expression. J Cell Biochem 103: 1309-1325.